Effector profile
PlantPEAD ID: PlantPEAD41431 Uniprot ID: A0A3M3LYX2 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 86840 Pathogen type: Bacteria
Species: Pseudomonas cannabina Strain: Other name:
Gene name: NCBI Gene ID: RBOW01000100
Entry name: A0A3M3LYX2_PSECA Protein name: Type III effector HopG1
DOI:
Gene/Protein information
Gene sequence:
AAAAATCATTGACTGTTTTATCGTAGAGGTAGGCGCTGCCCGCAAGATAAGCAGCGTACCTCATACTTCGGAAGTATGATTGAGAGCCATTACTAGATTTGCCTTTCGAATCGCCCTCGTGTGTCCGTGCGGTTTGAGTTGCGCTCAGCGCAGCGGATTCATTATTTTTTGCTATTGTATTAGCCGCTTCTTTCGTAGACGAGGCATTAAAGGTATTCTGCACCAGTCTTGAGGCTGAATAGAGATGACTGTTCCTTATTTGCATAAT
Protein sequence:
MMQIRNSHLYSASRLVQNTFNASSTKEAANTIAKNNESAALSATQTARTHEGDSKGKSSNGSQSYFRSMRYAAYLAGSAYLYDKTVNDF
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
9755.68 89 9.57 -0.708 29.82
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.