Effector profile
| PlantPEAD ID: PlantPEAD41436 | Uniprot ID: Q2VB00 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 346 | Pathogen type: Bacteria |
| Species: Xanthomonas citri | Strain: pv. citri) | Other name: |
| Gene name: AvrGf1 | NCBI Gene ID: DQ275469 | |
| Entry name: Q2VB00_XANCI | Protein name: AvrGf1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCTCCGAGCATGCATTCGGCGGCGTCGCCGGTTTCTGTCCTGCACTTGAGAGATACATCCATGCGCACCAAAGCCCAACTCCCATTGACTGCCATTCAACGGTTTCTTGCCCATGATGCAGCGTCAACGCAGGCCCCCTCTGCATCGGCATCCACATCGCTCCACAAAAATGAGACCGCAGGCTTGCTGGCAGCCTTGCCAGCGCGAAACGCCAGGCAAGGAGCGCAGAGGAAGTCCGGCGAAAAAGAAGGCGCACGCCAAAACAACGGGGGCCGGGGCGGACAATGGGCATCTCGGGCGGCCAAGTACGCCCTGGGAATCGCCGGTGCTGGCTATGTTGCAGACAATTTCGTTCTGTCCACGACATCGCTGGTCGATGGCAAAGGCGGCTTTACCAGTAATGATCGTTTGGATAAAGCATGCGCAAAGGCCGAGACGTATTACGCCCGGTACCACAGTGCCACTGAGGATGAGCGTGCATCCCATAGCCGCCCCTTTGTACCGATCAGAACGTGCGGTTCCAACCAGTTCGCCACCATGACCGACTACCGCGCGGCGACCAAGGTCCATGTCGGTCATCTTTTCGACAGCCAAGCCGCGCGCGAATCGCTCGTCACCAACCTCGCCTGCCTCAAGGGCGAGCGGATCAAGCAGGAGTGCATCATCAGGTATGCGCCTGCGCAGGTGCCAGCGGATCCGGACCTAAGCAAGAGCGAGCTGTACGACAGGAAAAACAAGTACTCGTTGGTTGGCATGCCCAACGCCCAAACCGGAGCAAGTGGATATACCTCACGCTCGATCACCCAGCCCTTCATCAACCGCGGCATGGAGCATTTCAGACAGGCTTCACAGAGCGACAAGGCACTGTCCCTGAGGCAGTGCATGCAATCGCTTGAACGGGCACTGCAGGACACTGACAAGCTTGGCAAGCAAGCACAGCACGCCGCCGGCCAGGCAATCCTGAATTTCCGGCAGGTCTATGCGGCCGACGAGCATTGGGGTCACCCGGAGAAAGTCATCATGAAAACCCTGATCGCCAACGGACTGCTATCGCAAGAACAAACCGACAGGATCGATGCGACCCTGATGTTCGAAGATCCCTCCATCAGTGTCCTGAAAAGAAATACCAGCATCGCCGGACCGTTACTGCAAAAACTGGAAACGAAGATTCAGTCAAAACGTCTGCAGGATCAACCTGAAACGCTTGCAGACTTCATGGAAATGGCTAAGCAGAAGAACATGGAAGGCCTGCCGATCGCGCACTTCAAACTCAACGCCGAAGGCACCGGTTTTGAAGACTGCTCTGGCCTGGGCGACTCGTTTACTAGTGCAAATGCCGTTGCATGCATCAACCATGCACGCTTGATGAGCGGAGAGCCGCGCCTTTCGAAAGAGGATGTCGGTGTCGTGGTTGCCTGCCTCAATGCTGTATACGACGATGCCAGCAGCATCCGGCACTCGCTTCATGAAATCGCACGCGGATGCTTCGTAGGTGCCGGCTATACAACGGAAGATGCCGATGCGTTCTATGAGCAGATTTGCAAGGATGCTGCACGGGCATTCTATGCAGGAAAGTCAATGACCAGCAGCGACTAA
Protein sequence:
MAPSMHSAASPVSVLHLRDTSMRTKAQLPLTAIQRFLAHDAASTQAPSASASTSLHKNETAGLLAALPARNARQGAQRKSGEKEGARQNNGGRGGQWASRAAKYALGIAGAGYVADNFVLSTTSLVDGKGGFTSNDRLDKACAKAETYYARYHSATEDERASHSRPFVPIRTCGSNQFATMTDYRAATKVHVGHLFDSQAARESLVTNLACLKGERIKQECIIRYAPAQVPADPDLSKSELYDRKNKYSLVGMPNAQTGASGYTSRSITQPFINRGMEHFRQASQSDKALSLRQCMQSLERALQDTDKLGKQAQHAAGQAILNFRQVYAADEHWGHPEKVIMKTLIANGLLSQEQTDRIDATLMFEDPSISVLKRNTSIAGPLLQKLETKIQSKRLQDQPETLADFMEMAKQKNMEGLPIAHFKLNAEGTGFEDCSGLGDSFTSANAVACINHARLMSGEPRLSKEDVGVVVACLNAVYDDASSIRHSLHEIARGCFVGAGYTTEDADAFYEQICKDAARAFYAGKSMTSSD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 57709.9 | 532 | 8.54 | -0.443 | 40.2 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: