Effector profile
| PlantPEAD ID: PlantPEAD41479 | Uniprot ID: A0A220WMT2 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 346 | Pathogen type: Bacteria |
| Species: Xanthomonas citri | Strain: pv. vignicola | Other name: |
| Gene name: | NCBI Gene ID: CP022263 | |
| Entry name: A0A220WMT2_XANCI | Protein name: Patatin | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATCGCGCTCCGCTGCCCCCGCTCGCTCGCCCTGTTGTCCATGCTCGGTCTGCTCAGCGCCTGCGGGGGCGAGCCGCGCCCGGCGACACCGGCGCCGGTGGTGCAGGCACCTTCGGCCGAAGCCCCCAAGCCCATCAAGATCGGCGTCGCGCTCGGTGGCGGTGCGGCCAAGGGCTTTGCGCATATCGGGGTGATCAAGATGCTCGAGGCCAACGGCTTCGCACCGGTGGTGGTCTCCGGTACCAGCGCCGGCAGCGTGGTGGGCGCGCTGTATGCCAGCGGCATGGATGCGTTCCAAATGCAGGAAAAGGCCGTTGCGCTCGACCAGACCAGCATCCGCGATGTGCGGCTGTTTTCCGGTGGCCTGGTGCAAGGCCAGAAACTGCAGGACTACGTCAACGAACAGCTGGGCGGCAAACCGATCGAAAAACTGCGCAAGCCGTTCGCGGCAGTCGCCACGCGTCTGGAAGATGGCGAACGCACCGTGTTCGTGCGCGGCAATGCCGGCCAGGCAGTGCGCGCGTCCAGCAGCATTCCCGGCGTGTTCGAGCCGGTGACCATCGGTAAGTACCACTTCGTCGATGGTGGCGTGGTCAGCCCGGTGCCGGTGGATGCGGCACGCCAGCTGGGTGCCGAATTCGTGGTGGCCGTGGATATTTCCAGCAAGGCCAGCGGCCAGAACCCAGGGGACCTGCTGGGCACGGTGAACCAGTCGATCTCGATCATGGGCCAGCGCCTGGGCGAGGCCGAACTCAAACGTGCCGACGTGGTCGTTCGCCCCAAGGTCAACGATATCGGCTCGGCCGATTTCAACCAGCGTGGTGCGGCGATCCTCGAAGGCGAGCGCGCCGCAATGGCGGTGATGCCGCAGATTCGCGCCAAGATTGCGCAACTGCAGGCCGCGCGCAGCAGCGCGACACGCACCGCCGCCGATCAGGCCAAAGCGGCCAGGCAACAGGCGTATGAGCGCTGCCTGGAACAACGCTCGCGTTGGGAAAAATTGCGCGGCAAGGACGAGGCCTGCGTAGCTCCGTGA
Protein sequence:
MIALRCPRSLALLSMLGLLSACGGEPRPATPAPVVQAPSAEAPKPIKIGVALGGGAAKGFAHIGVIKMLEANGFAPVVVSGTSAGSVVGALYASGMDAFQMQEKAVALDQTSIRDVRLFSGGLVQGQKLQDYVNEQLGGKPIEKLRKPFAAVATRLEDGERTVFVRGNAGQAVRASSSIPGVFEPVTIGKYHFVDGGVVSPVPVDAARQLGAEFVVAVDISSKASGQNPGDLLGTVNQSISIMGQRLGEAELKRADVVVRPKVNDIGSADFNQRGAAILEGERAAMAVMPQIRAKIAQLQAARSSATRTAADQAKAARQQAYERCLEQRSRWEKLRGKDEACVAP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 36048.5 | 345 | 9.49 | -0.017 | 40.84 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR016035,IPR002641
Pfam: PF01734
SMART:
KEGG:
PRINTS: