Effector profile
| PlantPEAD ID: PlantPEAD41483 | Uniprot ID: A1TNY0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 80869 | Pathogen type: Bacteria |
| Species: Paracidovorax citrulli | Strain: strain AAC00-1 | Other name: Acidovorax citrulli |
| Gene name: | NCBI Gene ID: CP000512 | |
| Entry name: A1TNY0_PARC0 | Protein name: Patatin | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGGGGGCCGCGGCGGGGCAGGAGCCGTCCAACCCCGCCAGCCCCGCGAGCTTCTGCAGGCGCGAGCGCTGCTCCAGGCAGGCCTGGTGCTGCGCCTCGGCGGCTTTCTGTTGCGCGAGCCGCGTGGCCTCGGCGCGCGCTGCCTGCAGCTGCGCCACGCGCTCGCGGATCTGCGGCATGGCGGCGAGGGCGGCTTTCTCGCCCTCCAGGATGGCGCCGGCGCGCTGCGTGAAGTCGGCCGCGCCGATGTCCAGCACCTGCGGGCGCACGACCACGTCGGCCCGCGCGAGTTCGGCCTGGCCGAGCTTCTGGCCCATGATCGCGATCGACTGGCCCAGGGTGCCCAGCATGTCGGCGGGCGCCTGGCCGCGCGCCTTGTTGGAGATGTCCACGGCGACCACGATGTCGGCCCCCAGCTGGCGCGCCGCGTCCACCGGCACCGGACTGACCACGCCGCCGTCCACGAAATGGTATTTGCCGGCCGCCACGGGCTGGAAGACGCCCGGTATGCTGCTGGAAGCGCGCACCGCCTGCCCGGTATTGCCGCGCGTGAACACCGTCCGCTCGCCGTCCTCCAGCCGCGTGGCCACGGCGGCGAAGGGCTTGGCCAGCTGCTCGATGGGCCGGTTGCGGACCTGCGCGTTCACATAGTCTTCGAGTTTCTGGCCGAGCACGAGTCCGCCGGAGGACAGCTGCAGGTCGCGGATCTTCGCCTCGTCGAGCGCCACGGCCTTTTCTTGCAGCTCGAAGGCGTTCATGCCGCTCGCATACAGCGCGCCCACCACGCTGCCCGCGCTGGTGCCGGCCACCACGGCGGGTGCCAGGCCGTTGGCCTCCAGCATCTTGATGACGCCGATGTGCGCGAAACCCTTGGCCGCACCGCCGCCCAGCGCGATGCCCACCTTGATGGGGGCCGGCGACGGAGCGGCAGCGGCCTGGGCGGGCGCGGCGGAAGGGGCGGCAGGCGGCGCGCTGCCGCAGGCGGCCAGAGCCGCAGCACTCAGGAGGACCAGGGGGCGCAACAGGGCGTTCGATCGCAT
Protein sequence:
MRSNALLRPLVLLSAAALAACGSAPPAAPSAAPAQAAAAPSPAPIKVGIALGGGAAKGFAHIGVIKMLEANGLAPAVVAGTSAGSVVGALYASGMNAFELQEKAVALDEAKIRDLQLSSGGLVLGQKLEDYVNAQVRNRPIEQLAKPFAAVATRLEDGERTVFTRGNTGQAVRASSSIPGVFQPVAAGKYHFVDGGVVSPVPVDAARQLGADIVVAVDISNKARGQAPADMLGTLGQSIAIMGQKLGQAELARADVVVRPQVLDIGAADFTQRAGAILEGEKAALAAMPQIRERVAQLQAARAEATRLAQQKAAEAQHQACLEQRSRLQKLAGLAGLDGSCPAAAP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 35038.3 | 346 | 9.19 | 0.177 | 44.54 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR016035,IPR002641
Pfam: PF01734
SMART:
KEGG: aav:Aave_2086
PRINTS: